Archives: Listings

Micron Advanced Microscopy Consortium

Technology development hub across Oxford University

SIMcheck

ImageJ tools for assessing SIM data quality and reliability
Created by Micron Oxford

Green Fluorescent blog

Blog on (mostly) fluorescent microscopy

pyCUDAdecon

Python wrapper for cudaDecon - 3D deconvolution
Created by Talley Lambert, Harvard Medical School

TIFFFolder

Easily parse/access a subset of data from a folder of TIFFs
Created by Talley Lambert, Harvard Medical School

LLSpy-SLM

Python app for generating SLM masks for lattice light sheet
Created by Talley Lambert, Harvard Medical School

LLSpy

Python library for lattice light sheet data processing
Created by Talley Lambert, Harvard Medical School

pyLattice

Python library for lattice light-sheet image analysis
Created by Johannes Schöneberg

Danuser Lab Software

Several different software packages available
Created by Danuser Lab, UTSW

OpenSPIM

A platform to build, adapt and enhance SPIM technology