Microlist – Microscopy courses, software, meetings & jobs

µlist

A searchable database of resources
for light and electron microscopists

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Our latest submissions

New on Microlist!

Visualizing membrane dynamics by electron microscopy

Visualizing membrane dynamics by electron microscopy

Two technical assistants-PostDocs – Advanced Bioimaging Unit – IP Montevideo

For Institut Pasteur of Montevideo
In Montevideo Departamento de Montevideo

Computational Imaging Researcher

For IMEC
In Leuven

New to Microlist!

vEM Online Education

Virtual Tour: Electron Microscopy Imaging

Allen Institute for Brain Science's Electron Microscopy program

Microscopy Image Browser

Video playlist on how to use Microscopy Image Browser

Electron microscopy manuals, lectures and tutorials

A variety of video resources for EM

Software Demo IMOD

Videos from the NBCR Summer Training Program

Harald Hess lecture - “Large Volume 3D Imaging by FIBSEM and Cryo Fluorescence for Cell Biology and Neural"

3D-CLEM lecture by Harald Hess

“Volume Electron Microscopy: Concepts, Correlations and Computations” with Kedar Narayan

Volume EM Series with Kedar Narayan

Correlative super resolution and electron microscopy methods for nanomedicine

Correlative microscopy talk by Silvia Pujals

Virtual Pub: Building a Volume EM community

An introduction to the Eurobioimaging 'virtual pub' series

Browse

Getting things done

Multi-view simulation

Code for simulating a multiview acquisition
Created by Preibisch Lab

SuRVoS Workbench

Super Region Volume Segmentation
Created by Diamond Light Source & The University of Nottingham.

PSFj

Software for point spread function analysis
Created by Knop Lab, ZMBH

CellOrganizer

Model learning tools
Created by Murphy Lab, Carnegie Mellon

Dragonfly (Non-Commercial Licensing)

Non-commercial license for Dragonfly software
Licensed by Object Research Systems

Resource List from Microscopy Services Laboratory (MSL)

A list of teaching and learning microscopy resources
Created by MSL UNC-Chapel Hill

easyFRAP

Quantitative and qualitative analysis of FRAP data
Created by Lygerou Lab

TIFFFolder

Easily parse/access a subset of data from a folder of TIFFs
Created by Talley Lambert, Harvard Medical School

The Open Microscopy Environment

Tools to support data management
Created by University of Dundee & Open Microscopy Environment

OpenFlexure Microscope

an open-source 3D-printed microscope
Created by R Bowman et al

Fluorescent Biosensor Database

Community-editable database of biosensors
Created by Eric Greenwald and the Jin Zhang lab at UCSD

CellCognition

Automatic analysis of high-content live cell imaging data
Created by Gerlich & Langer

Bio-Formats

For reading proprietary image data and metadata
Created by Open Microscopy Environment

NIH Figshare.com

A data repository for all NIH-funded researchers
Created by National Institutes of Health

Petr’s Microscopy Resources

An extensive list of microscopy resources
Created by Petr Schauer

pyCUDAdecon

Python wrapper for cudaDecon - 3D deconvolution
Created by Talley Lambert, Harvard Medical School

OMERO

View, organize, analyze and share imaging data
Created by University of Dundee & Open Microscopy Environment

Bioimage Informatics Index

An extensive database of image analysis tools
Created by NEUBIAS

SPIMagine

GPU accelerated volume rendering
Created by Weigert M

BioImage Archive

A hub for biological images
Created by EMBI-EBI

Browse by Technique

What are you in to?

Electron Microscopy

24 listings

Fluorescence Microscopy

15 listings

Confocal Microscopy

11 listings

Super-Resolution Microscopy

7 listings

Image Analysis

64 listings

Fluorescent Proteins

9 listings

Light Sheet Microscopy

15 listings

Quantitative Microscopy

6 listings

Machine Learning

20 listings

Find a meeting

Maybe we'll see you there

Explore all meetings

Microscopy Courses

Nothing beats full immersion

Master's Degree Programme in Biomedical Imaging

Location Turku, Finland, 60.45181, 22.26663

Nikon Imaging Center at Harvard Medical School Workshops

Format: In-person
Location Boston, MA, USA, 42.36008, -71.05888

Confocal Microscopy Course

Format: In-person
Location York, UK, 53.96142, -1.07391
Starts on 2023-09-12

Course on “Time-resolved Microscopy and Correlation Spectroscopy”

Format: Remote / Virtual
Starts on 2023-07-04

ABiS-GBI 2023 course - Image data: image analysis, data management and reuse

Format: In-person
Location Okazaki, Aichi, Japan, 34.95485, 137.17308
Starts on 2023-07-03

Resources by Location

Where do you want to be?

Europe

5 listings

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