Microlist – Microscopy courses, software, meetings & jobs

µlist

A searchable database of resources
for light microscopists

Our latest submissions

New on Microlist!

Correlated Imaging Weekly Lecture Series

Begins 2021-07-16
This event will take place online

Correlated Multimodal Imaging in Life Sciences (COMULIS) Conference

Begins 2021-09-01
This event will take place online

Introduction to digital bioimage analysis

5 days
in Porto, Portugal
Course starts on 2021-10-12

Some of our favs

Featured Listings

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY

Microcourses YouTube Channel

Short microscopy tutorials

Microforum

A forum for light microscopy discussion

Image Analysis Forum: image.sc

An image analysis discussion forum

Scientist in Light Microscopy Facility

For DZNE
In Bonn

Browse

Getting things done

FrapCalc

Analyzes FRAP curves with various models
Created by K Miura
Open source

Advanced Cell Classifier

Machine learning method for image data analysis
Created by Horvath Lab
Open source

ScanImage

Acquisition software for neurobiology apps
Created by Vidrio Technologies
Open source

smfBox

Build a single molecule FRET box
Created by Craggs Lab
Open source

pyLattice

Python library for lattice light-sheet image analysis
Created by Johannes Schöneberg
Open source

The Open Microscopy Environment

Tools to support data management
Created by University of Dundee & Open Microscopy Environment
Open source

SPIMagine

GPU accelerated volume rendering
Created by Weigert M
Open source

easyFRAP

Quantitative and qualitative analysis of FRAP data
Created by Lygerou Lab
Open source

Micro-Manager2 MacroExtensions

Allows ImageJ to access Micro-Manager2 functionalities
Created by Jerome Mutterer
Open source

PYthon Microscopy Environment

Image acquisition & analysis
Created by David Baddeley
Open source

Multi-view simulation

Code for simulating a multiview acquisition
Created by Preibisch Lab
Open source

μManager

For control of automated microscopes
Created by Mark Tsuchida, Chris Weisiger & Nico Stuurman in the Vale Lab, UCSF
Open source

Danuser Lab Software

Several different software packages available
Created by Danuser Lab, UTSW
Open source

Python Bioimage Computing Toolkit

Python functions, scripts, and classes
Created by Marcelo Cicconet
Open source

Thermo Fisher Scientific Fluorescence Spectraviewer

Fluorescence spectraviewer
Created by Thermo Fisher Scientific Inc
Open source

Image Data Resource

Online, public data repository
Created by University of Dundee & Open Microscopy Environment
Open source

Bioimage Informatics Index

An extensive database of image analysis tools
Created by NEUBIAS
Open source

Multi-view reconstruction

Software for reconstruction of multiview images
Created by Preibisch Lab
Open source

Petr’s Microscopy Resources

An extensive list of microscopy resources
Created by Petr Schauer
Open source

VisBio

Visualization and analysis of multidimensional image data
Created by C Rueden & A Sorber
Open source

Browse by Technique

What are you in to?

Fluorescent Proteins

9 listings

Super-Resolution Microscopy

9 listings

Image Analysis

62 listings

Light Sheet Microscopy

16 listings

Quantitative Microscopy

6 listings

Machine Learning

21 listings

Confocal Microscopy

9 listings

Detectors

8 listings

Fluorescence Microscopy

14 listings

Find a meeting

Maybe we'll see you there

Explore all meetings

Microscopy & Microanalysis 2021

Begins 2021-08-01
This event will take place in-person
in Pittsburgh

European Light Microscopy Initiative (ELMI) 2023

Begins 2023-06-06
This event will take place in-person
in Noordwijkerhout

Focus on Microscopy 2022

Begins 2022-04-10
This event will take place in-person
in Porto Portugal

Seeing is Believing: Imaging the Molecular Processes of Life

Begins 2021-10-05
This event will take place online
Must register by 2021-09-07
Abstract deadline is 2021-08-03

Microscopy Courses

Nothing beats full immersion

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY

Master's Degree Programme in Biomedical Imaging

in Turku, Finland

Master of Science in Microscopy and Imaging

in Galway, Ireland

Let's Experiment: A Guide for Scientists Working at the Bench

NIC@HMS Workshops - Boston, MA

1 days
in Boston, MA

List of Online Microscopy Talks

Online Course

Resources by Location

Where do you want to be?

Europe

17 listings

2 listings

33 listings

3 listings

No listings

2 listings

µlist

A searchable database of resourcesfor light microscopists

New on Microlist!

Correlated Imaging Weekly Lecture Series

Correlated Multimodal Imaging in Life Sciences (COMULIS) Conference

Introduction to digital bioimage analysis

Featured Listings

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

Microforum

Image Analysis Forum: image.sc

Scientist in Light Microscopy Facility

Categories

Courses

Tools

Online Learning

Meetings

Getting things done

FrapCalc

Advanced Cell Classifier

ScanImage

smfBox

pyLattice

The Open Microscopy Environment

SPIMagine

easyFRAP

Micro-Manager2 MacroExtensions

PYthon Microscopy Environment

Multi-view simulation

μManager

Danuser Lab Software

Python Bioimage Computing Toolkit

Thermo Fisher Scientific Fluorescence Spectraviewer

Image Data Resource

Bioimage Informatics Index

Multi-view reconstruction

Petr’s Microscopy Resources

VisBio

What are you in to?

Find a meeting

Microscopy & Microanalysis 2021

European Light Microscopy Initiative (ELMI) 2023

Focus on Microscopy 2022

Seeing is Believing: Imaging the Molecular Processes of Life

Nothing beats full immersion

Quantitative Imaging: From Acquisition to Analysis

Master's Degree Programme in Biomedical Imaging

Master of Science in Microscopy and Imaging

Let's Experiment: A Guide for Scientists Working at the Bench

NIC@HMS Workshops - Boston, MA

List of Online Microscopy Talks

Where do you want to be?

A searchable database of resources
for light microscopists