Microlist – Microscopy courses, software, meetings & jobs

µlist

A searchable database of resources
for light microscopists

Our latest submissions

New on Microlist!

Bioimage Informatics Index

An extensive database of image analysis tools
Created by NEUBIAS
Open source

Image Analysis Methods for Biologists

Online Course

Postdoctoral Associate: Machine Learning in Computational Biology

For Broad Institute of Harvard and MIT
In Cambridge MA

Some of our favs

Featured Listings

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Future dates TBA

Microcourses YouTube Channel

Online Course

Microforum

A forum for light microscopy discussion

Image Analysis Forum: image.sc

An image analysis discussion forum

Browse

Getting things done

Royal Microscopy Society Resources and Downloads

Compiled by the Royal Microscopy Society
Created by Royal Microscopy Society
Open source

LLSpy

Python library for lattice light sheet data processing
Created by Talley Lambert, Harvard Medical School
Open source

ScanImage

Acquisition software for neurobiology apps
Created by Vidrio Technologies
Open source

Open source laser engine

Parts list, CAD files & detailed descriptions
Created by Ries Lab, EMBL
Open source

Chroma Spectraviewer

A spectraviewer from the company Chroma
Created by Chroma Technology Corporation
Open source

Thermo Fisher Scientific Fluorescence Spectraviewer

Fluorescence spectraviewer
Created by Thermo Fisher Scientific Inc
Open source

Resource List from Microscopy Services Laboratory (MSL)

A list of teaching and learning microscopy resources
Created by MSL UNC-Chapel Hill
Open source

VisBio

Visualization and analysis of multidimensional image data
Created by C Rueden & A Sorber
Open source

pyCUDAdecon

Python wrapper for cudaDecon - 3D deconvolution
Created by Talley Lambert, Harvard Medical School
Open source

Image and Data Analysis Core Software List

A list of open-source software for image analysis
Open source

Fluorescent Biosensor Database

Community-editable database of biosensors
Created by Eric Greenwald and the Jin Zhang lab at UCSD
Open source

EAMNET Downloads

Links to Macros and software packages
Created by EAMNET
Open source

Advanced Cell Classifier

Machine learning method for image data analysis
Created by Horvath Lab
Open source

pyLattice

Python library for lattice light-sheet image analysis
Created by Johannes Schöneberg
Open source

Optogenetics Resource Center

All things optogenetics
Created by Deisseroth Lab at Stanford
Open source

Petr’s Microscopy Resources

An extensive list of microscopy resources
Created by Petr Schauer
Open source

BioImage Archive

A hub for biological images
Created by EMBI-EBI
Open source

Bioimage Informatics Index

An extensive database of image analysis tools
Created by NEUBIAS
Open source

Multi-view reconstruction

Software for reconstruction of multiview images
Created by Preibisch Lab
Open source

SIMcheck

ImageJ tools for assessing SIM data quality and reliability
Created by Micron Oxford
Open source

Browse by Technique

What are you in to?

Fluorescent Proteins

9 listings

Super-Resolution Microscopy

7 listings

Image Analysis

55 listings

Light Sheet Microscopy

18 listings

Quantitative Microscopy

6 listings

Machine Learning

14 listings

Confocal Microscopy

10 listings

Detectors

7 listings

Fluorescence Microscopy

14 listings

Find a meeting

Maybe we'll see you there

Explore all meetings

Microscience Microscopy Congress 2021

Begins 2021-07-05
This event will take place online
Must register by 2021-05-21
Abstract deadline is 2021-03-18

Core Technologies for Life Sciences 2021

Begins 2021-09-14
This event will take place in-person
in Lisboa

European Light Microscopy Initiative (ELMI) 2021

Begins 2021-06-22
This event will take place online

Light-Sheet Fluorescence Microscopy Virtual Conference

Begins 2021-05-09
This event will take place online

Microscopy Courses

Nothing beats full immersion

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Future dates TBA

Microcourses YouTube Channel

Online Course

Master's Degree Programme in Biomedical Imaging

in Turku, Finland

iBiology Microscopy Series

Online Course

Image Analysis with Fiji

Online Course

Master of Science in Microscopy and Imaging

in Galway, Ireland

Resources by Location

Where do you want to be?

Europe

12 listings

6 listings

18 listings

No listings

No listings

No listings

µlist

A searchable database of resourcesfor light microscopists

New on Microlist!

Bioimage Informatics Index

Image Analysis Methods for Biologists

Postdoctoral Associate: Machine Learning in Computational Biology

Featured Listings

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

Microforum

Image Analysis Forum: image.sc

Categories

Courses

Tools

Learning Materials

Meetings

Getting things done

Royal Microscopy Society Resources and Downloads

LLSpy

ScanImage

Open source laser engine

Chroma Spectraviewer

Thermo Fisher Scientific Fluorescence Spectraviewer

Resource List from Microscopy Services Laboratory (MSL)

VisBio

pyCUDAdecon

Image and Data Analysis Core Software List

Fluorescent Biosensor Database

EAMNET Downloads

Advanced Cell Classifier

pyLattice

Optogenetics Resource Center

Petr’s Microscopy Resources

BioImage Archive

Bioimage Informatics Index

Multi-view reconstruction

SIMcheck

What are you in to?

Find a meeting

Microscience Microscopy Congress 2021

Core Technologies for Life Sciences 2021

European Light Microscopy Initiative (ELMI) 2021

Light-Sheet Fluorescence Microscopy Virtual Conference

Nothing beats full immersion

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

Master's Degree Programme in Biomedical Imaging

iBiology Microscopy Series

Image Analysis with Fiji

Master of Science in Microscopy and Imaging

Where do you want to be?

A searchable database of resources
for light microscopists