Microlist – Microscopy courses, software, meetings & jobs

µlist

A searchable database of resources
for light microscopists

Our latest submissions

New on Microlist!

FrapCalc

Analyzes FRAP curves with various models
Created by K Miura
Open source

easyFRAP

Quantitative and qualitative analysis of FRAP data
Created by Lygerou Lab
Open source

VisBio

Visualization and analysis of multidimensional image data
Created by C Rueden & A Sorber
Open source

Some of our favs

Featured Listings

Facility Managers Training Course

2 days
in York, UK
Course starts on 2019-10-14

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Applications due on 2020-01-31
Course starts on 2020-03-24

Microcourses YouTube Channel

Online Course

FPbase

The Fluorescent Protein Database
Created by Talley Lambert, Harvard Medical School
Open source

Seeing is Believing - Imaging the Molecular Processes of Life

Begins 2019-10-09
in Heidelberg, Germany

iScopeCalc

A simulator for optical and digital resolution
Created by Talley Lambert, Harvard Medical School

FIJI

ImageJ bundled with a lot of plugins
Created by Curtis Rueden & the ImageJ development team at LOCI, U. Wisconsin-Madison
Open source

SIMcheck

ImageJ tools for assessing SIM data quality and reliability
Created by Micron Oxford
Open source

Browse

Getting things done

FIJI

ImageJ bundled with a lot of plugins
Created by Curtis Rueden & the ImageJ development team at LOCI, U. Wisconsin-Madison
Open source

iScopeCalc

A simulator for optical and digital resolution
Created by Talley Lambert, Harvard Medical School

FPbase

The Fluorescent Protein Database
Created by Talley Lambert, Harvard Medical School
Open source

SIMcheck

ImageJ tools for assessing SIM data quality and reliability
Created by Micron Oxford
Open source

pyLattice

Python library for lattice light-sheet image analysis
Created by Johannes Schöneberg
Open source

Optical Microscopy Course Educational Kit

A kit for a student-built light microscope
Created by Neil Switz & Dan Fletcher

Camera Simulator

An online camera simulator
Created by Talley Lambert
Licensed by Hamamatsu Photonics

Ray Optics Simulation

Simulate reflection and refraction of light
Created by Rick Tu

CellCognition

Automatic analysis of high-content live cell imaging data
Created by Gerlich & Langer
Open source

Pixel Chart

Created by Andrei Kashcha
Open source

Nemonic Consortium Resources & Blog

Resource list and blog for multiphoton microscopy

Image and Data Analysis Core Software List

A list of open-source software for image analysis

Petr’s Microscopy Resources

An extensive list of microscopy resources
Created by Petr Schauer

QuPath

software for whole slide image analysis
Created by Pete Bankhead and Jose Fernandez
Open source

BioImageXD

Analyzing, processing & visualizing nD images
Open source

Chroma Spectraviewer

A spectraviewer from the company Chroma
Created by Chroma Technology Corporation

PatternUnmixer 2.0

Object type recognition for automated analysis
Created by Murphy Lab, Carnegie Mellon

fairSIM

SIM reconstruction software
Created by Marcel Müller, Viola Mönkemöller, Simon Hennig, Wolfgang Hübner, Thomas Huser
Open source

BioImage Archive

A hub for biological images
Created by EMBI-EBI

The Microscopy and Microanalysis Facility Resource List

Resource list from a core at U of New Brunswick
Created by Microscopy and Microanalysis Facility

Browse by Technique

What are you in to?

Fluorescent Proteins

11 listings

Super-Resolution Microscopy

11 listings

Image Analysis

42 listings

Light Sheet Microscopy

12 listings

Quantitative Microscopy

8 listings

Machine Learning

9 listings

Confocal Microscopy

12 listings

Detectors

8 listings

Fluorescence Microscopy

16 listings

Find a meeting

Maybe we'll see you there

Explore all meetings

Seeing is Believing - Imaging the Molecular Processes of Life

Begins 2019-10-09
in Heidelberg, Germany

Microscopy & Microanalysis 2020

Begins 2020-08-02
in Milwaukee, WI, USA

European Microscopy Congress 2020

Begins 2020-08-23
in Copenhagen, Denmark

Image to Knowledge (I2K): ImageJ User and Developer Conference

Begins 2020-09-17
in Madison, WI, USA

Microscopy Courses

Nothing beats full immersion

Facility Managers Training Course

2 days
in York, UK
Course starts on 2019-10-14

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Applications due on 2020-01-31
Course starts on 2020-03-24

Microcourses YouTube Channel

Online Course

Bangalore Microscopy Course

8 days
in Bengaluru India
Future dates TBA

Master's Degree Programme in Biomedical Imaging

in Turku, Finland

19th Annual workshop on FLIM and FRET Microscopy

5 days
in Charlottesville, VA
Applications due on 2020-01-04
Course starts on 2020-03-09

Resources by Location

Where do you want to be?

Europe

45 listings

21 listings

61 listings

4 listings

No listings

2 listings

µlist

A searchable database of resourcesfor light microscopists

New on Microlist!

FrapCalc

easyFRAP

VisBio

Featured Listings

Facility Managers Training Course

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

FPbase

Seeing is Believing - Imaging the Molecular Processes of Life

iScopeCalc

FIJI

SIMcheck

Categories

Courses

Tools

Learning Materials

Meetings

Getting things done

FIJI

iScopeCalc

FPbase

SIMcheck

pyLattice

Optical Microscopy Course Educational Kit

Camera Simulator

Ray Optics Simulation

CellCognition

Pixel Chart

Nemonic Consortium Resources & Blog

Image and Data Analysis Core Software List

Petr’s Microscopy Resources

QuPath

BioImageXD

Chroma Spectraviewer

PatternUnmixer 2.0

fairSIM

BioImage Archive

The Microscopy and Microanalysis Facility Resource List

What are you in to?

Find a meeting

Seeing is Believing - Imaging the Molecular Processes of Life

Microscopy & Microanalysis 2020

European Microscopy Congress 2020

Image to Knowledge (I2K): ImageJ User and Developer Conference

Nothing beats full immersion

Facility Managers Training Course

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

Bangalore Microscopy Course

Master's Degree Programme in Biomedical Imaging

19th Annual workshop on FLIM and FRET Microscopy

Where do you want to be?

A searchable database of resources
for light microscopists