Microlist – Microscopy courses, software, meetings & jobs

µlist

A searchable database of resources
for light microscopists

Our latest submissions

New on Microlist!

Postdoctoral Training Program in Bioimage Analysis

For Broad Institute of MIT and Harvard
In 415 Main St

Electron Microscopist - Electron Microscopy Shared Resource

For St. Jude Children's Research Hospital
In Memphis

Research Fellow in Advanced Optical Imaging

For University of St Andrews
In School of Physics

Some of our favs

Featured Listings

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Future dates TBA

Microcourses YouTube Channel

Online Course

Microforum

A forum for light microscopy discussion

Image Analysis Forum: image.sc

An image analysis discussion forum

Browse

Getting things done

Camera Simulator

An online camera simulator
Created by Talley Lambert
Licensed by Hamamatsu Photonics
Open source

BigStitcher

Stitching for large datasets
Created by Preibisch Lab
Open source

PatternUnmixer 2.0

Object type recognition for automated analysis
Created by Murphy Lab, Carnegie Mellon
Open source

easyFRAP

Quantitative and qualitative analysis of FRAP data
Created by Lygerou Lab
Open source

Multi-view simulation

Code for simulating a multiview acquisition
Created by Preibisch Lab
Open source

SpekCheck

For filterset optimisation
Created by Micron Oxford
Open source

QuPath

software for whole slide image analysis
Created by Pete Bankhead and Jose Fernandez
Open source

NIH Figshare.com

A data repository for all NIH-funded researchers
Created by National Institutes of Health
Open source

Ray Optics Simulation

Simulate reflection and refraction of light
Created by Rick Tu
Open source

smfBox

Build a single molecule FRET box
Created by Craggs Lab
Open source

VisBio

Visualization and analysis of multidimensional image data
Created by C Rueden & A Sorber
Open source

Chroma Spectraviewer

A spectraviewer from the company Chroma
Created by Chroma Technology Corporation
Open source

Pixel Chart

Created by Andrei Kashcha
Open source

Optogenetics Resource Center

All things optogenetics
Created by Deisseroth Lab at Stanford
Open source

Mesmerize: A highly versatile platform for calcium imaging analysis

Platform for Calcium imaging analysis
Created by Kushal Kolar, Daniel Dondorp, Marios Chatzigeorgiou
Open source

The Microscope Objective Patent Explorer

Compare objective lens properties
Created by Juan David Lizarazo Ferro
Open source

OpenSPIM

A platform to build, adapt and enhance SPIM technology
Open source

Thermo Fisher Scientific Fluorescence Spectraviewer

Fluorescence spectraviewer
Created by Thermo Fisher Scientific Inc
Open source

AIDAhisto

A tool optimised for quantification of histological staining of mouse brain tissue
Created by Niklas Pallast and Markus Aswendt
Open source

PSFj

Software for point spread function analysis
Created by Knop Lab, ZMBH
Open source

Browse by Technique

What are you in to?

Fluorescent Proteins

9 listings

Super-Resolution Microscopy

6 listings

Image Analysis

49 listings

Light Sheet Microscopy

15 listings

Quantitative Microscopy

6 listings

Machine Learning

16 listings

Confocal Microscopy

9 listings

Detectors

7 listings

Fluorescence Microscopy

12 listings

Find a meeting

Maybe we'll see you there

Explore all meetings

Microscience Microscopy Congress 2021

Begins 2021-07-05
This event will take place in-person
in Manchester

Core Technologies for Life Sciences 2021

Begins 2021-09-14
This event will take place in-person
in Lisboa

European Light Microscopy Initiative (ELMI) Meeting 2021

Begins 2021-06-22
This event will take place in-person
in Nordwijkerhout

Virtual Frontiers in BioImaging 2020

Begins 2020-11-17
This event will take place online

Microscopy Courses

Nothing beats full immersion

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Future dates TBA

Microcourses YouTube Channel

Online Course

Master's Degree Programme in Biomedical Imaging

in Turku, Finland

iBiology Microscopy Series

Online Course

Image Analysis with Fiji

Online Course

Master of Science in Microscopy and Imaging

in Galway, Ireland

Resources by Location

Where do you want to be?

Europe

8 listings

6 listings

9 listings

No listings

No listings

No listings

µlist

A searchable database of resourcesfor light microscopists

New on Microlist!

Postdoctoral Training Program in Bioimage Analysis

Electron Microscopist - Electron Microscopy Shared Resource

Research Fellow in Advanced Optical Imaging

Featured Listings

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

Microforum

Image Analysis Forum: image.sc

Categories

Courses

Tools

Learning Materials

Meetings

Getting things done

Camera Simulator

BigStitcher

PatternUnmixer 2.0

easyFRAP

Multi-view simulation

SpekCheck

QuPath

NIH Figshare.com

Ray Optics Simulation

smfBox

VisBio

Chroma Spectraviewer

Pixel Chart

Optogenetics Resource Center

Mesmerize: A highly versatile platform for calcium imaging analysis

The Microscope Objective Patent Explorer

OpenSPIM

Thermo Fisher Scientific Fluorescence Spectraviewer

AIDAhisto

PSFj

What are you in to?

Find a meeting

Microscience Microscopy Congress 2021

Core Technologies for Life Sciences 2021

European Light Microscopy Initiative (ELMI) Meeting 2021

Virtual Frontiers in BioImaging 2020

Nothing beats full immersion

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

Master's Degree Programme in Biomedical Imaging

iBiology Microscopy Series

Image Analysis with Fiji

Master of Science in Microscopy and Imaging

Where do you want to be?

A searchable database of resources
for light microscopists