Microlist – Microscopy courses, software, meetings & jobs

µlist

A searchable database of resources
for light microscopists

Our latest submissions

New on Microlist!

Imaging Week 2019 at UMass Medical School

Begins 2019-11-18
in Worcester, MA, USA

Imaging Core Leader

For Apex Systems
In New York, NY, USA

Director of Biological Imaging Core Facility

For University of Albany
In Albany, NY, USA

Some of our favs

Featured Listings

Facility Managers Training Course

2 days
in York, UK
Course starts on 2019-10-14

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Applications due on 2020-01-31
Course starts on 2020-03-24

Microcourses YouTube Channel

Online Course

FPbase

The Fluorescent Protein Database
Created by Talley Lambert, Harvard Medical School
Open source

Seeing is Believing - Imaging the Molecular Processes of Life

Begins 2019-10-09
in Heidelberg, Germany

iScopeCalc

A simulator for optical and digital resolution
Created by Talley Lambert, Harvard Medical School

FIJI

ImageJ bundled with a lot of plugins
Created by Curtis Rueden & the ImageJ development team at LOCI, U. Wisconsin-Madison
Open source

SIMcheck

ImageJ tools for assessing SIM data quality and reliability
Created by Micron Oxford
Open source

Browse

Getting things done

iScopeCalc

A simulator for optical and digital resolution
Created by Talley Lambert, Harvard Medical School

FIJI

ImageJ bundled with a lot of plugins
Created by Curtis Rueden & the ImageJ development team at LOCI, U. Wisconsin-Madison
Open source

SIMcheck

ImageJ tools for assessing SIM data quality and reliability
Created by Micron Oxford
Open source

FPbase

The Fluorescent Protein Database
Created by Talley Lambert, Harvard Medical School
Open source

pyCUDAdecon

Python wrapper for cudaDecon - 3D deconvolution
Created by Talley Lambert, Harvard Medical School
Open source

Multi-view simulation

Code for simulating a multiview acquisition
Created by Preibisch Lab
Open source

BigStitcher

Stitching for large datasets
Created by Preibisch Lab
Open source

pyLattice

Python library for lattice light-sheet image analysis
Created by Johannes Schöneberg
Open source

Pixel Chart

Created by Andrei Kashcha
Open source

ScanImage

Acquisition software for neurobiology apps
Created by Vidrio Technologies
Open source

CellOrganizer

Model learning tools
Created by Murphy Lab, Carnegie Mellon

NIH Figshare.com

A data repository for all NIH-funded researchers
Created by National Institutes of Health

OpenSPIM

A platform to build, adapt and enhance SPIM technology
Open source

Fluorescent Biosensor Database

Community-editable database of biosensors
Created by Eric Greenwald and the Jin Zhang lab at UCSD

TIFFFolder

Easily parse/access a subset of data from a folder of TIFFs
Created by Talley Lambert, Harvard Medical School
Open source

BisQue

Store, visualize, organize and analyze in the cloud
Created by UCSB Center for Bio-image Informatics

Nemonic Consortium Resources & Blog

Resource list and blog for multiphoton microscopy

Image Analysis Focused Interest Group

Content to support the image analysis community
Created by Royal Microscopy Society

LLSpy

Python library for lattice light sheet data processing
Created by Talley Lambert, Harvard Medical School
Open source

PYthon Microscopy Environment

Image acquisition & analysis
Created by David Baddeley
Open source

Browse by Technique

What are you in to?

Fluorescent Proteins

12 listings

Super-Resolution Microscopy

12 listings

Image Analysis

39 listings

Light Sheet Microscopy

13 listings

Quantitative Microscopy

9 listings

Machine Learning

11 listings

Confocal Microscopy

13 listings

Detectors

8 listings

Fluorescence Microscopy

16 listings

Find a meeting

Maybe we'll see you there

Explore all meetings

Seeing is Believing - Imaging the Molecular Processes of Life

Begins 2019-10-09
in Heidelberg, Germany

Microscopy & Microanalysis 2020

Begins 2020-08-02
in Milwaukee, WI, USA

European Microscopy Congress 2020

Begins 2020-08-23
in Copenhagen, Denmark

Society of Biomolecular Imaging and Informatics

Begins 2019-09-17
in Boston, MA, USA

Microscopy Courses

Nothing beats full immersion

Facility Managers Training Course

2 days
in York, UK
Course starts on 2019-10-14

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Applications due on 2020-01-31
Course starts on 2020-03-24

Microcourses YouTube Channel

Online Course

Bangalore Microscopy Course

8 days
in Bengaluru India
Future dates TBA

Master's Degree Programme in Biomedical Imaging

in Turku, Finland

19th Annual workshop on FLIM and FRET Microscopy

5 days
in Charlottesville, VA
Applications due on 2020-01-04
Course starts on 2020-03-09

Resources by Location

Where do you want to be?

Europe

45 listings

20 listings

75 listings

3 listings

No listings

1 listing

µlist

A searchable database of resourcesfor light microscopists

New on Microlist!

Imaging Week 2019 at UMass Medical School

Imaging Core Leader

Director of Biological Imaging Core Facility

Featured Listings

Facility Managers Training Course

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

FPbase

Seeing is Believing - Imaging the Molecular Processes of Life

iScopeCalc

FIJI

SIMcheck

Categories

Courses

Tools

Learning Materials

Meetings

Getting things done

iScopeCalc

FIJI

SIMcheck

FPbase

pyCUDAdecon

Multi-view simulation

BigStitcher

pyLattice

Pixel Chart

ScanImage

CellOrganizer

NIH Figshare.com

OpenSPIM

Fluorescent Biosensor Database

TIFFFolder

BisQue

Nemonic Consortium Resources & Blog

Image Analysis Focused Interest Group

LLSpy

PYthon Microscopy Environment

What are you in to?

Find a meeting

Seeing is Believing - Imaging the Molecular Processes of Life

Microscopy & Microanalysis 2020

European Microscopy Congress 2020

Society of Biomolecular Imaging and Informatics

Nothing beats full immersion

Facility Managers Training Course

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

Bangalore Microscopy Course

Master's Degree Programme in Biomedical Imaging

19th Annual workshop on FLIM and FRET Microscopy

Where do you want to be?

A searchable database of resources
for light microscopists