Microlist – Microscopy courses, software, meetings & jobs

µlist

A searchable database of resources
for light microscopists

Some of our favs

Featured Listings

Facility Managers Training Course

2 days
in York, UK

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Applications due on 2020-01-31

Microcourses YouTube Channel

Online Course

FPbase

The Fluorescent Protein Database
Created by Talley Lambert, Harvard Medical School
Open source

Seeing is Believing - Imaging the Molecular Processes of Life

Begins 2019-10-09
in Heidelberg, Germany

iScopeCalc

A simulator for optical and digital resolution
Created by Talley Lambert, Harvard Medical School

FIJI

ImageJ bundled with a lot of plugins
Created by Curtis Rueden & the ImageJ development team at LOCI, U. Wisconsin-Madison
Open source

SIMcheck

ImageJ tools for assessing SIM data quality and reliability
Created by Micron Oxford
Open source

Browse

Getting things done

FIJI

ImageJ bundled with a lot of plugins
Created by Curtis Rueden & the ImageJ development team at LOCI, U. Wisconsin-Madison
Open source

FPbase

The Fluorescent Protein Database
Created by Talley Lambert, Harvard Medical School
Open source

SIMcheck

ImageJ tools for assessing SIM data quality and reliability
Created by Micron Oxford
Open source

iScopeCalc

A simulator for optical and digital resolution
Created by Talley Lambert, Harvard Medical School

PSFj

Software for point spread function analysis
Created by Knop Lab, ZMBH
Open source

pyLattice

Python library for lattice light-sheet image analysis
Created by Johannes Schöneberg
Open source

LLSpy

Python library for lattice light sheet data processing
Created by Talley Lambert, Harvard Medical School
Open source

LLSpy-SLM

Python app for generating SLM masks for lattice light sheet
Created by Talley Lambert, Harvard Medical School
Open source

fairSIM

SIM reconstruction software
Created by Marcel Müller, Viola Mönkemöller, Simon Hennig, Wolfgang Hübner, Thomas Huser
Open source

The Microscopy and Microanalysis Facility Resource List

Resource list from a core at U of New Brunswick
Created by Microscopy and Microanalysis Facility

Icy

Platform for bioimage informatics
Created by Quantitative Image Analysis Unit, Institut Pasteur

Thermo Fisher Scientific Fluorescence Spectraviewer

Fluorescence spectraviewer
Created by Thermo Fisher Scientific Inc

CellProfiler

For measuring and analyzing cell images
Created by Carpenter Lab, Broad Institute

Optogenetics Resource Center

All things optogenetics
Created by Deisseroth Lab at Stanford

Camera Simulator

An online camera simulator
Created by Talley Lambert
Licensed by Hamamatsu Photonics

OpenSPIM

A platform to build, adapt and enhance SPIM technology
Open source

TIFFFolder

Easily parse/access a subset of data from a folder of TIFFs
Created by Talley Lambert, Harvard Medical School
Open source

Chroma Spectraviewer

A spectraviewer from the company Chroma
Created by Chroma Technology Corporation

Bio-Formats

For reading proprietary image data and metadata
Created by Open Microscopy Environment
Open source

Danuser Lab Software

Several different software packages available
Created by Danuser Lab, UTSW
Open source

Browse by Technique

What are you in to?

Fluorescent Proteins

8 listings

Super-Resolution Microscopy

12 listings

Image Analysis

30 listings

Light Sheet Microscopy

8 listings

Quantitative Microscopy

8 listings

Machine Learning

5 listings

Confocal Microscopy

7 listings

Detectors

6 listings

Fluorescence Microscopy

8 listings

Find a meeting

Maybe we'll see you there

Explore all meetings

Seeing is Believing - Imaging the Molecular Processes of Life

Begins 2019-10-09
in Heidelberg, Germany

Microscopy & Microanalysis 2019

Begins 2019-08-04
in Portland, OR, USA

Microscience Microscopy Congress 2019

Begins 2019-07-01
in Manchester, UK

Microscopy & Microanalysis 2020

Begins 2020-08-02
in Milwaukee, WI, USA

Microscopy Courses

Nothing beats full immersion

Facility Managers Training Course

2 days
in York, UK

Quantitative Imaging: From Acquisition to Analysis

14 days
in Cold Spring Harbor, NY
Applications due on 2020-01-31

Microcourses YouTube Channel

Online Course

Bangalore Microscopy Course

8 days
in Bengaluru India

Master's Degree Programme in Biomedical Imaging

in Turku, Finland

Advanced Fluorescence Imaging Techniques

6 days
in Heidelberg, Germany

Resources by Location

Where do you want to be?

Europe

23 listings

22 listings

61 listings

2 listings

1 listing

1 listing

µlist

A searchable database of resourcesfor light microscopists

Featured Listings

Facility Managers Training Course

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

FPbase

Seeing is Believing - Imaging the Molecular Processes of Life

iScopeCalc

FIJI

SIMcheck

Categories

Courses

Tools

Learning Materials

Meetings

Getting things done

FIJI

FPbase

SIMcheck

iScopeCalc

PSFj

pyLattice

LLSpy

LLSpy-SLM

fairSIM

The Microscopy and Microanalysis Facility Resource List

Icy

Thermo Fisher Scientific Fluorescence Spectraviewer

CellProfiler

Optogenetics Resource Center

Camera Simulator

OpenSPIM

TIFFFolder

Chroma Spectraviewer

Bio-Formats

Danuser Lab Software

What are you in to?

Find a meeting

Seeing is Believing - Imaging the Molecular Processes of Life

Microscopy & Microanalysis 2019

Microscience Microscopy Congress 2019

Microscopy & Microanalysis 2020

Nothing beats full immersion

Facility Managers Training Course

Quantitative Imaging: From Acquisition to Analysis

Microcourses YouTube Channel

Bangalore Microscopy Course

Master's Degree Programme in Biomedical Imaging

Advanced Fluorescence Imaging Techniques

Where do you want to be?

A searchable database of resources
for light microscopists