Archives: Listings

Napari

Fast ND image viewer for python
Created by Sofroniew, Royer, Nunez-Iglesias et al (doi:10.5281/zenodo.3555620)

LEGOLish

A lego approach to SPIM/LSFM
Created by Colombelli, Tosi & Andilla

CSBDeep

A toolbox for Content-aware Image Restoration (CARE)
Created by Weigert M et al

AOmicroscopy

Guides for adaptive optics microscopy

AIDAhisto

A tool optimised for quantification of histological staining of mouse brain tissue
Created by Niklas Pallast and Markus Aswendt

Python for Microscopist Videos

YouTube channel with educational videos on Python coding

Bioimage Analysis Course: Life cycle of an image data set

Graduate student level introduction to bioimage analysis

Image Tools Resource

List of open-source analysis software for bioimaging
Created by Image Data Resource

Global BioImaging International Job Shadowing Program for Core Staff

Visit imaging facilities across the globe & learn from peers

FrapCalc

Analyzes FRAP curves with various models
Created by K Miura